Bioscience Core Lab NGS, qPCR and Single Cell Genomics

KingFisher Duo Prime system

Kingfisher Duo Prime System allows the extraction of DNA, RNA and protein from many matrices, i.e. body fluids, plants, animals and bacteria. Extraction protocols are customizable. Specific kits and plasticware are not provided.

Thermo Fisher
706
Building 2, Level 2 East
Bioscience Core Lab NGS, qPCR and Single Cell Genomics

Bioanalyser-Post_PCR_bcl

The Agilent Bioanalyzer uses a micro-capillary based electrophoretic cell that allows rapid and sensitive investigation of nucleic acid samples. The instrument provides precise information on the fragment size distributions. Typical applications are: library QC, total RNA QC, small RNA QC
Sample type: DNA, RNA, NGS libraries

Agilent Technologies
G2938C
Building 2, Level 2 East
Bioscience Core Lab NGS, qPCR and Single Cell Genomics

BioMark HD

High-throughput microfluidics-based qPCR for DNA, RNA and miRNA analysis. Chip for 96 primers and 96 samples or 12 primers and 12 samples. Workflow can be couple with C1 using 96.96/12.12 IFC from Single Cell Capture module.
Sample - median cell size should be within the range of each chip (between 5 and 25 micron) and 166 to 250K cells / ml Total RNA, minimum 5 ng; RNA concentration 5 pg/ul or higher. Minimum volume, 10 ul.

Fluidigm
BioMark HD
Building 2, Level 2 East
Analytical Chemistry Core Lab Proteomics

Ultra Centrifuge 2003386

Optima L-100K preparative ultracentrifuge is capable of performing large-volume separation more efficiently. Ideal for applications such as high-purity plasmid DNA, subcellular particles and virus isolations, this versatile floor model operates with a broad range of superb rotors, including zonal and continuous flow for large-volume separations.

Beckman Coulter, Inc.
Optima L-100K
Building 2, Level 2 East
Analytical Chemistry Core Lab Proteomics

Orbitrap Fusion Lumos

The Thermo Scientific™ Orbitrap Fusion™ Lumos™ Tribrid™ Mass Spectrometer is equipped with nano-LC system.
This instrument excels at the most challenging of applications, including low level PTM analysis, multiplexed relative quantitation using isobaric tags (TMT and iTRAQ), as well as MSn analysis of peptides.
This system incorporates a wide range of fragmentation techniques such as HCD, CID and ETD fragmentation.
In BCL, the Fusion Lumos is dedicated to bottom-up proteomics providing MS data from purified peptide mixtures with varying levels of complexity.

Thermo Fisher
Orbital Fusion Lumos
Building 2, Level 2 East
Analytical Chemistry Core Lab Proteomics

Mosquito NanoVolume Pippettor

Mosquito crystal automates protein crystallisation vapour diffusion set-ups, additive screening, and microseeding - pipetting in the 25 nL - 1,200 nL range.

TTP Labtech ltd
Mosquito
Building 2, Level 2 East
Prototyping and Product Development Core Lab Central Fabrication Lab

Bigrep One

The BigRep ONE was created to make industrial 3D printing of large-scale objects as easy and affordable as possible. German-engineered for better quality, higher speed, and increased safety, when using room temperature materials. The BigRep ONE won the German Design Award 2016 and continues to be used in a diverse range of industries and applications.
Dimensions (mm) x 1850 y 2250 z 1725 Weight Printer ca. 460 kg.
Website: https://bigrep.com/

Bigrep
Bigrep ONE 01/2019
Building 4, Level 0 West
Analytical Chemistry Core Lab Proteomics

Thermo Sorvall centrifuge

Superspeed centrifuge for high-throughput sample processing, offering high speeds and RCFs.

Thermo Fisher
Sorvall RC-6 Plus
Building 2, Level 2 East
Prototyping and Product Development Core Lab Central Fabrication Lab

Stratasys J750

The Stratasys J750™ 3D Printer delivers unrivaled
aesthetic performance including true, full-color
capability with texture mapping and color gradients.
Create prototypes that look, feel and operate like
finished products.
Automatic color mapping from your design software lets you create photo-realistic models—from neutrals to neons, shadows to highlights and beyond.
SYSTEM SIZE AND WEIGHT
1400 x 1260 x 1100 mm (55.1 x 49.6 x 43.4 in.); 430 kg (948 lbs.)
BUILD SIZE
490 x 390 x 200 mm (19.3 x 15.35 x 7.9 in.)
Website: https://www.stratasys.com/

Stratasys
J750
Building 4, Level 0 West
Analytical Chemistry Core Lab Proteomics

Freeze Dryer (Lyophilizer)

Large capacity freeze dryer with condenser capacity of 25 Liters.

VirTIS
FM 25XL 70
Building 2, Level 2 East
Analytical Chemistry Core Lab Proteomics

Maxis UHR Q-TOF

ESI-QTOF (Maxis) mass spectrometer is used for life science research, drug discovery & development, and screening applications involving the analysis of unknown compounds in complex matrices.
Currently, the system is used for intact protein analysis and molecular mass determination.
Sample - purified proteins or peptides in quantities to be discussed with lab scientist. Users can be trained to perform sample preparation and analysis independently.

Bruker
Maxis
Building 2, Level 2 East
Analytical Chemistry Core Lab Proteomics

UHPLC System - HPLC2

Dionex Ultimate 3000 Autosampler. Can separate, fractionate and quantify different components of the sample protein, peptide and small molecule.
Sample - protein, peptide and small molecule with quantity to be discussed with lab scientist.
UHPLC System Parts (Marked with Purple Stickers):
KAUST 2012232 - Solvent Rack (Purple Sticker)
KAUST 2012231 - Binary Pump (Purple Sticker)
KAUST 2005623 - Autosampler (Purple Sticker)
KAUST 2012230 - Column Compartment (Purple Sticker)

Thermo Fisher
WPS3000SC Analytical
Building 2, Level 2 East
Supercomputing Core Lab Supercomputing Core Lab

Ibex

Ibex a cluster of 300 compute nodes, 22 large memory, and 60 GPU nodes.

Building 1, Level 0 West
Analytical Chemistry Core Lab Proteomics

Beckman Avanti High Speed Centrifuge

Avanti J-E centrifuge is designed to achieve a high degree of separation in a size compatible with operations.

Beckman Coulter, Inc.
Avanti JE
Building 2, Level 2 East
Imaging and Characterization Core Lab NMR Spectroscopy

800M SB Liquid NMR

The 800 MHz NMR spectrometer system is dedicated to solution-state NMR applications. It is equipped with a 5 mm triple resonance inverse (TCI) H/F-C/N-D cryoprobe, featuring automatic tuning and matching (ATM) and a Z-gradient, with a variable temperature range from -40°C to +150°C. The system also includes a 5 mm TXI H/F-C/N probe, capable of variable temperature (VT) operation from -150°C to +150°C, with ATM functionality. Additionally, the spectrometer is equipped with a SampleCase sample changer, providing a 24-sample capacity for automated experiments.

Bruker
Avance neo 800
Building 3, Level 0 West
Bioscience Core Lab NGS, qPCR and Single Cell Genomics

QuantStudio 3 Real-Time PCR system

QuantStudio 3 Real-Time PCR System produces quantification data with the precision and sensitivity.
Ideal for low throughout qPCR and genotyping.
This systems accept 0.2 mL tubes or plates only.

Applied Biosystems
n/a
Building 2, Level 2 East
Analytical Chemistry Core Lab Proteomics

Monolith Microscale Thermophoresis System

Nanotemper Monolith nt.115 pico system measures molecular interaction with MicroScale Thermophoresis (MST) technollogy.

Nano Temper Technologies
Monolith NT.115 Pico
Building 2, Level 2 East
Bioscience Core Lab NGS, qPCR and Single Cell Genomics

Nanodrop Spectrophotometer_2005620


Thermo Fisher
Nanodrop 8000
Building 2, Level 2 East
Analytical Chemistry Core Lab Proteomics

Nanodrop_2012221

Spectrophotometer for Protein and nucleic acids with or without fluorescent labeling, requiring very small amount of samples

Thermo Fisher
Nanodrop 8000
Building 2, Level 2 East
Bioscience Core Lab NGS, qPCR and Single Cell Genomics

Nanodrop Spectrophotometer_2003385


Thermo Fisher
Nanodrop 8000
Building 2, Level 2 East